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Phylogenetic Trees - Clitopilus Etc
Data for Maximum Likelihood phylogenetic trees published in: New species and combinations of some New Zealand agarics belonging to Clitopilus, Lyophyllum, Gerhardtia, Clitocybe,... -
Ramana_et_al_Metabarcoding_sequence_data_of_AMF_from_plant roots
Raw metabarcoding sequencing data from Ramana et al. Root diameter, host specificity and arbuscular mycorrhizal fungal community composition among native and exotic plant... -
Makiola et al DNA metabarcoding sequence data
Raw DNA metabarcoding sequence files from Makiola et al.Land use is a determinant of plant pathogen alpha- but not beta-diversity. Mol Ecol. 2019; 28: 3786– 3798.... -
Supplementary data for publication: First Report of Ralstonia pseudosolanacea...
Additional information on the strains and sequences used in this study: Ireland KB, Weir BS, Cother EJ, Phantavong S, Phitsanoukane P, Vongvichid K, Vongphachanh PP, Songvilay... -
Leotiomycetes phylogeny 2019
Supplementary data for publication Johnston et al. 2019. A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes. IMA Fungus 10(1): 1-22.... -
Genetic validation of historical plant pathology records – a case study based...
Supplementary data for publication in Plant Pathology -
Concatenated alignment for Stephanosporaceae Phylogenetic tree
Concatenated alignment (ITS, LSU, tef1) for 126 OTUS analysed for Bayesian phylogenetic tree in article: Teresa Lebel, Michael A. Castellano, Ross E. Beever, Cryptic diversity... -
Supplementary data for publication: Trichoderma down under: Species diversity...
Additional information on the strains and sequences used in this study of the genetic and taxonomic diversity of the genus Trichoderma in New Zealand. Australasian Plant... -
Dung beetle microbiome data
Data associated with a manuscript submitted to Journal of New Zealand zoology titled: Parasiticides do not cause a fatal microbiome shift in dung beetles - a pilot study by Eva... -
Mycorrhizal communities of Lophomyrtus bullata
Fungal ITS and 18S metabarcoding data associated with Lophomyrtus bullata, and associated code used to process and analyse the data. This relates to the paper The mycorrhizal... -
Ashley Dene lysimeter experiment 1
Processed DNA metabarcoding data and analysis code from an experiment to investigate temporal effects of labile carbon inputs on bacterial and fungal biodiversity in urine... -
Ashley Dene deep soil cores
Processed DNA metabarcoding data and analysis code from Ashley Dene deep soil cores analysis project, relating to the manuscript: Depth-structuring of multi-kingdom soil... -
New Zealand wetland prokaryote 16S metabarcoding
Data from: Wood JR, Burge OR, Bolstridge N, Bonner K, Clarkson B, Cole TL, Davis C, Fergus A, King P, McKeown M, Morse C, Richardson SJ, Robertson H, Wilmshurst JM (In press)... -
18S DNA metabarcoding of Atacama rodent middens
Unassembled .fastq files of paired-end reads used in: Wood et al. (2018) Plant pathogen responses to Late Pleistocene and Holocene climate change in central Atacama Desert,... -
Next Generation Biodiversity Assessment Phase I
Bioinformatic pipeline, analysis and DNA dataset relating to the publication: Wood, J. R., R. J. Holdaway, K. H. Orwin, C. Morse, K. I. Bonner, C. Davis, N. Bolstridge, and I.... -
Calloriaceae sensu Baral in Jaklitsch 2019
Some notes of Calloriaceae sensu Baral (in Jaklitsch et al., 2019, Syllabus of Plant families, Ascomycota) -
Hymenotorrendiella clelandii and related species - Suppl. Data
Supplementary data from the paper Johnston PR, Park D [in press]. Hymenotorrendiella clelandii (Leotiomycetes, Helotiales, Helotiaceae) and related species from Australia and... -
Penicillium literature review Appendix 1
A spreadsheet listing all 487 accepted Penicillium species, their occurrence in New Zealand (based on NZFungi2 data), notes of their lifestyle, and diagnostic DNA sequences.... -
A vegetation tool for wetland delineation in New Zealand
The USA has developed a robust wetland delineation system for regulatory purposes comprising three criteria: vegetation, soils, and hydrology. We developed a vegetation-based... -
Handbook for Monitoring Wetland Condition
Clarkson B.R., Sorrell B.K., Reeves P.N., Champion P.D., Partridge T.R., Clarkson B.D. 2003: Handbook for monitoring wetland condition (Revised October 2004). Coordinated...
