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Land use impacts on soil invertebrate biodiversity
Soil invertebrates COI DNA metabarcoding data, analysis code, and outputs, relating to the paper Andrew Dopheide, Andreas Makiola, Kate H. Orwin, Robert J. Holdaway, Jamie R.... -
Black swan egg harvest experiment data
Data on black swan egg-laying rates, egg hatching probability, and overall nest hatching success associated with different customary egg harvest regimes implemented at Te... -
Indices of possum abundance and browse at forest sites in New Zealand
Data associated with paper: Holland, E. P., Gormley, A. M. and Pech, R. P. (2016), Species- and site-specific impacts of an invasive herbivore on tree survival in mixed forests.... -
Multiple capture trap data
Data and spatial model for assessing effectiveness of using multiple and single capture traps. The data support an article in PLoS ONE: Warburton, B., & Gormley, A. M.... -
Ecological requirements of NZ birds
Resource requirements (feeding and nesting) for selected New Zealand bird species and the spatial availability of these resources based on New Zealand LCDB3 cover classes -
MiSeq barcoding of 450 invertebrates data
Demultiplexed Illumina sequence data (COI) from 450 invertebrate specimens, related to the paper Fast-tracking bespoke DNA reference database generation from museum collections... -
Ashley Dene lysimeter experiment 1
Processed DNA metabarcoding data and analysis code from an experiment to investigate temporal effects of labile carbon inputs on bacterial and fungal biodiversity in urine... -
Livestock as sentinels for wildlife disease
Pseudo-code for a model written in Python that uses livestock disease surveillance data to make inference on the disease status of sympatric or adjacent living wildlife. -
Bio-economic optimisation of surveillance to confirm broadscale eradications ...
Python computer code for a 2-stage bio-economic model to identify optimal cost-efficient surveillance strategies for assessing progress and ultimately declaring success of... -
Mycorrhizal communities of Lophomyrtus bullata
Fungal ITS and 18S metabarcoding data associated with Lophomyrtus bullata, and associated code used to process and analyse the data. This relates to the paper The mycorrhizal... -
Computational reproducibility within the New Zealand Journal of Ecology
R code to reproduce the figures used in: Etherington TR, Brock JMP, Perry GLW, Wyse SV (2021) Implementing the Transparency and Openness Promotion (TOP) Guidelines for data and... -
Climatic limits of temperate rainforest tree species
This project contains the data files and R script supporting the paper: Laughlin DC, Delzon S, Clearwater MJ, Bellingham PJ, McGlone MS, Richardson SJ 2020. Climatic limits of... -
Optimising survey effort to monitor environmental variables
A new statistical power analysis R package simr informs environmental monitoring design within New Zealand's main kiwifruit growing region (Bay of Plenty). The pilot data for 13... -
Tree contributions to climate change adaptation through reduced cattle heat s...
Supporting data and code for the publication "Tree contributions to climate change adaptation through reduced cattle heat stress and benefits to milk and beef production".... -
Effects of Phytophthora agathidicida on kauri (Agathis australis) phyllosphere
Bacterial 16S and fungal ITS metabarcoding data from kauri (Agathis australis) phyllosphere samples, for investigating effects of the soil-borne pathogen Phytophthora... -
Effects of Phosphite on Arbuscular Mycorrhizal Fungal Colonisation in Kauri (...
DNA metabarcoding data targeting arbuscular mycorrhizal fungi (AMF) from kauri (Agathis australis) root samples, for investigating the effects of phosphite treatment on AMF... -
Supplementary data for publication: First Report of Ralstonia pseudosolanacea...
Additional information on the strains and sequences used in this study: Ireland KB, Weir BS, Cother EJ, Phantavong S, Phitsanoukane P, Vongvichid K, Vongphachanh PP, Songvilay... -
Novel yeasts from New Zealand forests
Supplementary data for a three papers describing three new yeasts from New Zealand forests -
GPS location data for Bennett's wallaby in South Island, New Zealand
This data corresponds to GPS telemetry data collected to estimate detection probabilities, describe resource selection and movements rates, and report capture statistics for... -
Ashley Dene deep soil cores
Processed DNA metabarcoding data and analysis code from Ashley Dene deep soil cores analysis project, relating to the manuscript: Depth-structuring of multi-kingdom soil...
