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Indices of possum abundance and browse at forest sites in New Zealand
Data associated with paper: Holland, E. P., Gormley, A. M. and Pech, R. P. (2016), Species- and site-specific impacts of an invasive herbivore on tree survival in mixed forests.... -
Mycorrhizal communities of Lophomyrtus bullata
Fungal ITS and 18S metabarcoding data associated with Lophomyrtus bullata, and associated code used to process and analyse the data. This relates to the paper The mycorrhizal... -
Ashley Dene lysimeter experiment 1
Processed DNA metabarcoding data and analysis code from an experiment to investigate temporal effects of labile carbon inputs on bacterial and fungal biodiversity in urine... -
Ramana_et_al_Metabarcoding_sequence_data_of_AMF_from_plant roots
Raw metabarcoding sequencing data from Ramana et al. Root diameter, host specificity and arbuscular mycorrhizal fungal community composition among native and exotic plant... -
Ashley Dene deep soil cores
Processed DNA metabarcoding data and analysis code from Ashley Dene deep soil cores analysis project, relating to the manuscript: Depth-structuring of multi-kingdom soil... -
Makiola et al DNA metabarcoding sequence data
Raw DNA metabarcoding sequence files from Makiola et al.Land use is a determinant of plant pathogen alpha- but not beta-diversity. Mol Ecol. 2019; 28: 3786– 3798.... -
Leotiomycetes phylogeny updated October 2022
This unpublished phylogeny is based on the same set of genes used by Johnston et al. (2019) and uses the same methods. The 2019 dataset has been expanded to include additional... -
Thelebolales DNA data, Quijada et al. 20xx
Data for the analysis presented in Fig 1 in the paper Quijada et al. 20xx, "Apothecial ancestry, evolution, and re-evolution in Thelebolales (Leotiomycetes, Fungi)" The data... -
Optimising survey effort to monitor environmental variables
A new statistical power analysis R package simr informs environmental monitoring design within New Zealand's main kiwifruit growing region (Bay of Plenty). The pilot data for 13... -
Penicillium literature review Appendix 1
A spreadsheet listing all 487 accepted Penicillium species, their occurrence in New Zealand (based on NZFungi2 data), notes of their lifestyle, and diagnostic DNA sequences.... -
Black swan egg harvest experiment data
Data on black swan egg-laying rates, egg hatching probability, and overall nest hatching success associated with different customary egg harvest regimes implemented at Te... -
Climatic limits of temperate rainforest tree species
This project contains the data files and R script supporting the paper: Laughlin DC, Delzon S, Clearwater MJ, Bellingham PJ, McGlone MS, Richardson SJ 2020. Climatic limits of... -
Dung beetle microbiome data
Data associated with a manuscript submitted to Journal of New Zealand zoology titled: Parasiticides do not cause a fatal microbiome shift in dung beetles - a pilot study by Eva... -
New Zealand wetland prokaryote 16S metabarcoding
Data from: Wood JR, Burge OR, Bolstridge N, Bonner K, Clarkson B, Cole TL, Davis C, Fergus A, King P, McKeown M, Morse C, Richardson SJ, Robertson H, Wilmshurst JM (In press)... -
18S DNA metabarcoding of Atacama rodent middens
Unassembled .fastq files of paired-end reads used in: Wood et al. (2018) Plant pathogen responses to Late Pleistocene and Holocene climate change in central Atacama Desert,... -
Next Generation Biodiversity Assessment Phase I
Bioinformatic pipeline, analysis and DNA dataset relating to the publication: Wood, J. R., R. J. Holdaway, K. H. Orwin, C. Morse, K. I. Bonner, C. Davis, N. Bolstridge, and I.... -
Lachnaceae in New Zealand - Aotearoa
A brief informal outline of the diversity of Lachnaceae (Leotiomycetes, Helotiales) known for New Zealand, based on PDD and ICMP specimens with DNA sequences. The phylogenetic... -
Pseudopithomyces fungi and facial eczema
This dataset is a collection of supplementary data associated with a forthcoming publication on the Pseudopithomyces fungi associated with the disease facial eczema -
Hyphodiscaceae DNA data, Quijada et al. 2022
Data for the analysis presented as Figs 1 and 2 in the paper Quijada et al. "A review of Hyphodiscaceae". The data provided includes the concatenated alignments, the partitions... -
New Rhizodiscina and saprobic Sclerococcum species from Aotearoa New Zealand
Descriptions of a set of Rhizodiscina and Sclerococcum spp. formally named in Index Fungorum no. 519, 2022...
