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Indices of possum abundance and browse at forest sites in New Zealand
Data associated with paper: Holland, E. P., Gormley, A. M. and Pech, R. P. (2016), Species- and site-specific impacts of an invasive herbivore on tree survival in mixed forests.... -
Surveillance effort and cost to prevent an incursion and Batrachochytrium sal...
Salamander importation data into the U.S., and Python scripts for analysing data and conducting a simulation experiment. Used in paper submitted to 'EcoHealth.' -
Data associated with Invasive urban mammalian predators: distribution and mul...
Invasive mammalian predator detection data in urban habitats, supporting the paper "Miller, K.F.; Wilson, D.J.; Innes, J. G.; Fitzgerald, N.B., Miller, P.; van Heezik, Y. 2022.... -
Home range use and habitat selection of Auckland Island Pigs
Data and Python scripts for analysis for the NZJE paper: "Analysis of spatiotemporal patterns of home range use and habitat selection to inform an eradication strategy for feral... -
Inferential and forward projection modelling to evaluate options for controll...
Data for analysis of stoat eradication from Resolution Island, New Zealand. Included is an Excel spreadsheet for calculating the net present value of alternative management... -
Ashley Dene lysimeter experiment 1
Processed DNA metabarcoding data and analysis code from an experiment to investigate temporal effects of labile carbon inputs on bacterial and fungal biodiversity in urine... -
National Possum Model videos
Supplementary material associated with paper: J. D. Shepherd, S. Gillingham, T. Heuer, M. C. Barron, A. E. Byrom, R. P. Pech 2017. Multi-scale dynamic maps for the management of... -
Alignment of ordinal and quantitative species abundance and size indices
Alignment of ordinal and quantitative species abundance and size indices for the detection of shifting baseline syndrome Data associated with the publication Lyver, P.O'B.... -
A refined transcriptome dataset for the NZ brushtail possum
This is the refined transcriptome as described in a 2019 Data in Brief paper by White, Trought and Hopkins entitled 'The mixed liver and heart transcriptome dataset of the New... -
Possum network adjacency matrices
The adjacency matrices for the possum contact networks at four sites (A, B, C, D) in the Orongorongo valley, New Zealand. Social contact network data associated with James et... -
Black swan egg harvest experiment data
Data on black swan egg-laying rates, egg hatching probability, and overall nest hatching success associated with different customary egg harvest regimes implemented at Te... -
Climatic limits of temperate rainforest tree species
This project contains the data files and R script supporting the paper: Laughlin DC, Delzon S, Clearwater MJ, Bellingham PJ, McGlone MS, Richardson SJ 2020. Climatic limits of... -
Optimising survey effort to monitor environmental variables
A new statistical power analysis R package simr informs environmental monitoring design within New Zealand's main kiwifruit growing region (Bay of Plenty). The pilot data for 13... -
Data and code for understanding spatially explicit capture-recapture paramete...
Data and novel computer code for analysing telemetry and trapping data of brushtail possums (Trichosurus vulpecula) across 18 sites in New Zealand. Results provide insights into... -
Livestock as sentinels for wildlife disease
Pseudo-code for a model written in Python that uses livestock disease surveillance data to make inference on the disease status of sympatric or adjacent living wildlife. -
Bio-economic optimisation of surveillance to confirm broadscale eradications ...
Python computer code for a 2-stage bio-economic model to identify optimal cost-efficient surveillance strategies for assessing progress and ultimately declaring success of... -
Short-term possum foraging movements
Data supporting the article in PLoS ONE: Yockney IJ, Latham MC, Rouco C, Cross ML, Nugent G (2015) Quantifying Short-Term Foraging Movements in a Marsupial Pest to Improve... -
Mycorrhizal communities of Lophomyrtus bullata
Fungal ITS and 18S metabarcoding data associated with Lophomyrtus bullata, and associated code used to process and analyse the data. This relates to the paper The mycorrhizal... -
Land use impacts on soil invertebrate biodiversity
Soil invertebrates COI DNA metabarcoding data, analysis code, and outputs, relating to the paper Andrew Dopheide, Andreas Makiola, Kate H. Orwin, Robert J. Holdaway, Jamie R.... -
Computational reproducibility within the New Zealand Journal of Ecology
R code to reproduce the figures used in: Etherington TR, Brock JMP, Perry GLW, Wyse SV (2021) Implementing the Transparency and Openness Promotion (TOP) Guidelines for data and...
