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Optimising survey effort to monitor environmental variables
A new statistical power analysis R package simr informs environmental monitoring design within New Zealand's main kiwifruit growing region (Bay of Plenty). The pilot data for 13... -
Ecological requirements of NZ birds
Resource requirements (feeding and nesting) for selected New Zealand bird species and the spatial availability of these resources based on New Zealand LCDB3 cover classes -
Data from "The effects of one-off aerial 1080 possum-control operations on co...
Overview 1080 was applied to two sites in 2012, one on the East Coast of the South Island and the other on the West Coast. Each site had a paired no-1080 site nearby. Birds and... -
Home range use and habitat selection of Auckland Island Pigs
Data and Python scripts for analysis for the NZJE paper: "Analysis of spatiotemporal patterns of home range use and habitat selection to inform an eradication strategy for feral... -
Surveillance effort and cost to prevent an incursion and Batrachochytrium sal...
Salamander importation data into the U.S., and Python scripts for analysing data and conducting a simulation experiment. Used in paper submitted to 'EcoHealth.' -
Inferential and forward projection modelling to evaluate options for controll...
Data for analysis of stoat eradication from Resolution Island, New Zealand. Included is an Excel spreadsheet for calculating the net present value of alternative management... -
Alignment of ordinal and quantitative species abundance and size indices
Alignment of ordinal and quantitative species abundance and size indices for the detection of shifting baseline syndrome Data associated with the publication Lyver, P.O'B.... -
Ramana_et_al_Metabarcoding_sequence_data_of_AMF_from_plant roots
Raw metabarcoding sequencing data from Ramana et al. Root diameter, host specificity and arbuscular mycorrhizal fungal community composition among native and exotic plant... -
Penicillium literature review Appendix 1
A spreadsheet listing all 487 accepted Penicillium species, their occurrence in New Zealand (based on NZFungi2 data), notes of their lifestyle, and diagnostic DNA sequences.... -
Makiola et al DNA metabarcoding sequence data
Raw DNA metabarcoding sequence files from Makiola et al.Land use is a determinant of plant pathogen alpha- but not beta-diversity. Mol Ecol. 2019; 28: 3786– 3798.... -
Possum network adjacency matrices
The adjacency matrices for the possum contact networks at four sites (A, B, C, D) in the Orongorongo valley, New Zealand. Social contact network data associated with James et... -
Rowi virus sequence
The virus was found from a collaboration between Landcare Research (Dan White, Dan Tompkins), ESR (Richard Hall), DOC (Kate McInnes) and Massey University (Brett Gartrell). Some... -
Data and code for understanding spatially explicit capture-recapture paramete...
Data and novel computer code for analysing telemetry and trapping data of brushtail possums (Trichosurus vulpecula) across 18 sites in New Zealand. Results provide insights into... -
Livestock as sentinels for wildlife disease
Pseudo-code for a model written in Python that uses livestock disease surveillance data to make inference on the disease status of sympatric or adjacent living wildlife. -
Bio-economic optimisation of surveillance to confirm broadscale eradications ...
Python computer code for a 2-stage bio-economic model to identify optimal cost-efficient surveillance strategies for assessing progress and ultimately declaring success of... -
Calloriaceae sensu Baral in Jaklitsch 2019
Some notes of Calloriaceae sensu Baral (in Jaklitsch et al., 2019, Syllabus of Plant families, Ascomycota) -
Hymenotorrendiella clelandii and related species - Suppl. Data
Supplementary data from the paper Johnston PR, Park D [in press]. Hymenotorrendiella clelandii (Leotiomycetes, Helotiales, Helotiaceae) and related species from Australia and... -
Phylogenetic Trees - Clitopilus Etc
Data for Maximum Likelihood phylogenetic trees published in: New species and combinations of some New Zealand agarics belonging to Clitopilus, Lyophyllum, Gerhardtia, Clitocybe,... -
A vegetation tool for wetland delineation in New Zealand
The USA has developed a robust wetland delineation system for regulatory purposes comprising three criteria: vegetation, soils, and hydrology. We developed a vegetation-based... -
Handbook for Monitoring Wetland Condition
Clarkson B.R., Sorrell B.K., Reeves P.N., Champion P.D., Partridge T.R., Clarkson B.D. 2003: Handbook for monitoring wetland condition (Revised October 2004). Coordinated...
