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Optimising survey effort to monitor environmental variables
A new statistical power analysis R package simr informs environmental monitoring design within New Zealand's main kiwifruit growing region (Bay of Plenty). The pilot data for 13... -
Ecological requirements of NZ birds
Resource requirements (feeding and nesting) for selected New Zealand bird species and the spatial availability of these resources based on New Zealand LCDB3 cover classes -
Ashley Dene deep soil cores
Processed DNA metabarcoding data and analysis code from Ashley Dene deep soil cores analysis project, relating to the manuscript: Depth-structuring of multi-kingdom soil... -
Possum network adjacency matrices
The adjacency matrices for the possum contact networks at four sites (A, B, C, D) in the Orongorongo valley, New Zealand. Social contact network data associated with James et... -
Rowi virus sequence
The virus was found from a collaboration between Landcare Research (Dan White, Dan Tompkins), ESR (Richard Hall), DOC (Kate McInnes) and Massey University (Brett Gartrell). Some... -
Dung beetle microbiome data
Data associated with a manuscript submitted to Journal of New Zealand zoology titled: Parasiticides do not cause a fatal microbiome shift in dung beetles - a pilot study by Eva... -
Mycorrhizal communities of Lophomyrtus bullata
Fungal ITS and 18S metabarcoding data associated with Lophomyrtus bullata, and associated code used to process and analyse the data. This relates to the paper The mycorrhizal... -
Ramana_et_al_Metabarcoding_sequence_data_of_AMF_from_plant roots
Raw metabarcoding sequencing data from Ramana et al. Root diameter, host specificity and arbuscular mycorrhizal fungal community composition among native and exotic plant... -
Ashley Dene lysimeter experiment 1
Processed DNA metabarcoding data and analysis code from an experiment to investigate temporal effects of labile carbon inputs on bacterial and fungal biodiversity in urine... -
New Zealand wetland prokaryote 16S metabarcoding
Data from: Wood JR, Burge OR, Bolstridge N, Bonner K, Clarkson B, Cole TL, Davis C, Fergus A, King P, McKeown M, Morse C, Richardson SJ, Robertson H, Wilmshurst JM (In press)... -
Makiola et al DNA metabarcoding sequence data
Raw DNA metabarcoding sequence files from Makiola et al.Land use is a determinant of plant pathogen alpha- but not beta-diversity. Mol Ecol. 2019; 28: 3786– 3798.... -
18S DNA metabarcoding of Atacama rodent middens
Unassembled .fastq files of paired-end reads used in: Wood et al. (2018) Plant pathogen responses to Late Pleistocene and Holocene climate change in central Atacama Desert,... -
Next Generation Biodiversity Assessment Phase I
Bioinformatic pipeline, analysis and DNA dataset relating to the publication: Wood, J. R., R. J. Holdaway, K. H. Orwin, C. Morse, K. I. Bonner, C. Davis, N. Bolstridge, and I.... -
Pacific Metrosideros occurrence data
Occurrences of Metrosideros species across the south-central Pacific -
Helotiales on Elaeocarpus leaves
Summary of the species of Helotiales (Leotiomycetes, the inoperculate discomycetes) found on Elaeocarpus leaves in New Zealand, together with an identification key, brief... -
Tree contributions to climate change adaptation through reduced cattle heat s...
Supporting data and code for the publication "Tree contributions to climate change adaptation through reduced cattle heat stress and benefits to milk and beef production".... -
core_weathering_wsa
chemical data: core and solutes submission to journal in review -
Lachnaceae in New Zealand - Aotearoa
A brief informal outline of the diversity of Lachnaceae (Leotiomycetes, Helotiales) known for New Zealand, based on PDD and ICMP specimens with DNA sequences. The phylogenetic... -
Adélie penguin census data
Aerial reconnaissance and photography are used in the Ross Sea sector of Antarctica to determine the breeding locations of Adélie penguins and to count the numbers of nests... -
Revisiting the bicontinental allopolyploid origin of Australasian Lepidium sp...
Supporting files for the manuscript Revisiting the bicontinental allopolyploid origin of Australasian Lepidium species with amplicon sequencing of 15 nuclear genes.