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Supplementary data for publication: First Report of Ralstonia pseudosolanacea...
Additional information on the strains and sequences used in this study: Ireland KB, Weir BS, Cother EJ, Phantavong S, Phitsanoukane P, Vongvichid K, Vongphachanh PP, Songvilay... -
Land use impacts on soil invertebrate biodiversity
Soil invertebrates COI DNA metabarcoding data, analysis code, and outputs, relating to the paper Andrew Dopheide, Andreas Makiola, Kate H. Orwin, Robert J. Holdaway, Jamie R.... -
Code for A History of Open Temperature and Rainfall with Uncertainty in New Z...
Python code used to process data in the production of A History of Open Weather in New Zealand (HOWNZ): an open access 1 km resolution monthly 1910-2019 time-series of... -
Binary space partitioning neutral landscape models code
Python and NetLogo code used to create binary space partitioning neutral landscape models in support of the paper: Etherington TR, Morgan FJ, O’Sullivan D. Binary space... -
Phylogeny of New Zealand ascomycetes
Miscellaneous notes based on DNA sequence data from ascomycete specimens in the New Zealand Fungarium (PDD) and the International Collection of Microorganisms from Plants (ICMP) -
Untangling the Lactifluus clarkeae - Lf. flocktonae (Russulaceae) species com...
Sequence alignment and high resolution trees for the paper: Untangling the Lactifluus clarkeae - Lf. flocktonae (Russulaceae) species complex in Australasia. Teresa Lebel, James... -
Puccinia otagensis
Species of rust, accession number, and GenBank numbers of taxa included in the analyses. -
Data - Biases in the metabarcoding of plant pathogens
We investigated and analysed the causes of differences between next-generation sequencing metabarcoding approaches and traditional DNA cloning in the detection and... -
Species wood density data
Species-specific wood density data for New Zealand trees as used in the following analysis: Holdaway RJ, Easdale T, Carswell FE, Richardson SJ, Peltzer DA, Mason NWH, Brandon A,... -
LUCAS natural forest plot-level biomass and ecosystem driver data
Plot-level biomass and ecosystem driver data as used in the following analysis: Holdaway RJ, Easdale T, Carswell FE, Richardson SJ, Peltzer DA, Mason NWH, Brandon A, Coomes DA.... -
Phylogenetic Trees - Clitopilus Etc
Data for Maximum Likelihood phylogenetic trees published in: New species and combinations of some New Zealand agarics belonging to Clitopilus, Lyophyllum, Gerhardtia, Clitocybe,... -
Code: Modelling habituation of introduced predators
Python computer code for the individual based model simulating olfactory habituation of introduced mammalian predators to unrewarding bird odours in New Zealand. Associated... -
New Zealand Bark Thickness 2015
We measured the bark thickness of 82 New Zealand tree species and tested whether variation in bark thickness was related to variation in other plant traits and whether... -
Soil function and PLFA data for five land uses in the Wairau Valley, NZ
Data associated with Orwin et al. 2016, which investigates the ability of soil microbial community biomass, composition, diversity and traits to predict soil carbon and nutrient... -
Surveillance effort and cost to prevent an incursion and Batrachochytrium sal...
Salamander importation data into the U.S., and Python scripts for analysing data and conducting a simulation experiment. Used in paper submitted to 'EcoHealth.' -
Biodiversity Uncertainty
Data and R scripts used in paper: Mason NWH, Holdaway RJ, Richardson SJ. Incorporating measurement error in testing for changes in biodiversity. Methods Ecol Evol.... -
Bio-economic optimisation of surveillance to confirm broadscale eradications ...
Python computer code for a 2-stage bio-economic model to identify optimal cost-efficient surveillance strategies for assessing progress and ultimately declaring success of... -
Inferential and forward projection modelling to evaluate options for controll...
Data for analysis of stoat eradication from Resolution Island, New Zealand. Included is an Excel spreadsheet for calculating the net present value of alternative management... -
Next Generation Biodiversity Assessment Phase I
Bioinformatic pipeline, analysis and DNA dataset relating to the publication: Wood, J. R., R. J. Holdaway, K. H. Orwin, C. Morse, K. I. Bonner, C. Davis, N. Bolstridge, and I....