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A least-cost network neutral landscape model of human sites and routes
Code and data in support of the paper: Etherington TR, O’Sullivan D, Perry GLW, Richards DR, Wainwright J (2024) A least-cost network neutral landscape model of human sites and... -
Land use impacts on soil invertebrate biodiversity
Soil invertebrates COI DNA metabarcoding data, analysis code, and outputs, relating to the paper Andrew Dopheide, Andreas Makiola, Kate H. Orwin, Robert J. Holdaway, Jamie R.... -
Fuzzy alpha-shapes code
R and Python code to generate fuzzy alpha-shapes that can be used to map uncertain spatial objects from point samples -
Code for A History of Open Temperature and Rainfall with Uncertainty in New Z...
Python code used to process data in the production of A History of Open Weather in New Zealand (HOWNZ): an open access 1 km resolution monthly 1910-2019 time-series of... -
Binary space partitioning neutral landscape models code
Python and NetLogo code used to create binary space partitioning neutral landscape models in support of the paper: Etherington TR, Morgan FJ, O’Sullivan D. Binary space... -
Computational reproducibility within the New Zealand Journal of Ecology
R code to reproduce the figures used in: Etherington TR, Brock JMP, Perry GLW, Wyse SV (2021) Implementing the Transparency and Openness Promotion (TOP) Guidelines for data and... -
virtualNicheR: generating virtual fundamental and realised niches for use in ...
To evaluate how well species-environment models perform in different situations, modellers need the ability to generate virtual niches that have known properties. These virtual... -
National Possum Model videos
Supplementary material associated with paper: J. D. Shepherd, S. Gillingham, T. Heuer, M. C. Barron, A. E. Byrom, R. P. Pech 2017. Multi-scale dynamic maps for the management of... -
Code: Modelling habituation of introduced predators
Python computer code for the individual based model simulating olfactory habituation of introduced mammalian predators to unrewarding bird odours in New Zealand. Associated... -
Livestock as sentinels for wildlife disease
Pseudo-code for a model written in Python that uses livestock disease surveillance data to make inference on the disease status of sympatric or adjacent living wildlife. -
Surveillance effort and cost to prevent an incursion and Batrachochytrium sal...
Salamander importation data into the U.S., and Python scripts for analysing data and conducting a simulation experiment. Used in paper submitted to 'EcoHealth.' -
Bio-economic optimisation of surveillance to confirm broadscale eradications ...
Python computer code for a 2-stage bio-economic model to identify optimal cost-efficient surveillance strategies for assessing progress and ultimately declaring success of... -
Inferential and forward projection modelling to evaluate options for controll...
Data for analysis of stoat eradication from Resolution Island, New Zealand. Included is an Excel spreadsheet for calculating the net present value of alternative management...
