33 datasets found

New Zealand fungi and slime moulds : pdfs containing photos, descriptions and comments based on specimens collected by Ann Bell and Dan Mahoney at PDD (NZ Systematics Collection...

Fungal ITS amplicon sequencing results from Waitakere kauri root and soil samples

Supplementary data files for Johnston & Park (2025). An updated multigene phylogeny of Leotiomycetes. Persoonia 55: 527-566. https://doi.org/10.3114/persoonia.2025.55.13

Additional information on the strains and sequences used in this study of the genetic and taxonomic diversity of the genus Trichoderma in New Zealand. Australasian Plant...

The Systematics Collections Data (SCD) website provides access to specimen and culture data from the Allan Herbarium (CHR), the International Collection of Micro-organisms from...

Some notes and an ITS-based phylogeny that includes recently available sequences suggesting Chlorovibrissea sensu Sandoval-Leiva et al. 2014 is polyphyletic.

All files are in .csv format. The single file "Field_distributions_and_metadata.csv" contains (for each of 249 non-marine samples from the Ross Sea Sector, continental...

ITS based phylogeny of New Zealand taxa that appear to be congeneric with the type of Phaeohelotium.

Alignments for each of the genes used in the multigene phylogeny (Fig 1) and the ITS phylogeny (Fig 2) in paper published in Fungal Systematics and Evolution 6: 233-242, 2020....

Supplementary data for publication Johnston et al. 2019. A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes. IMA Fungus 10(1): 1-22....

Phylogeny showing Austropezia and related unnamed species from New Zealand belong in Han et al. (2014) Clade 3, part of Pezizellaceae sensu lato.

This dataset is a collection of supplementary data associated with a publication on the Pseudopithomyces fungi associated with the disease facial eczema. The publication...

A brief informal outline of the diversity of Lachnaceae (Leotiomycetes, Helotiales) known for New Zealand, based on PDD and ICMP specimens with DNA sequences. The phylogenetic...

These notes are based on PDD specimens and ICMP cultures of Annulohypoxylon from which DNA sequences are available. These specimens represent five species of Annulohypoxylon,...

Summary of the species of Helotiales (Leotiomycetes, the inoperculate discomycetes) found on Elaeocarpus leaves in New Zealand, together with an identification key, brief...

Fungal ITS and 18S metabarcoding data associated with Lophomyrtus bullata, and associated code used to process and analyse the data. This relates to the paper The mycorrhizal...

Raw metabarcoding sequencing data from Ramana et al. Root diameter, host specificity and arbuscular mycorrhizal fungal community composition among native and exotic plant...

This unpublished phylogeny is based on the same set of genes used by Johnston et al. (2019) and uses the same methods. The 2019 dataset has been expanded to include additional...

Processed DNA metabarcoding data and analysis code from an experiment to investigate temporal effects of labile carbon inputs on bacterial and fungal biodiversity in urine...

Processed DNA metabarcoding data and analysis code from Ashley Dene deep soil cores analysis project, relating to the manuscript: Depth-structuring of multi-kingdom soil...