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Effects of Phytophthora agathidicida on kauri (Agathis australis) phyllosphere
Bacterial 16S and fungal ITS metabarcoding data from kauri (Agathis australis) phyllosphere samples, for investigating effects of the soil-borne pathogen Phytophthora... -
Effects of Phosphite on Arbuscular Mycorrhizal Fungal Colonisation in Kauri (...
DNA metabarcoding data targeting arbuscular mycorrhizal fungi (AMF) from kauri (Agathis australis) root samples, for investigating the effects of phosphite treatment on AMF... -
Antarctic Soils Database
This database contains site and soil descriptions as well as associated soil chemical, physical and mineralogical data for 912 sites in Antarctica. They were collected during 30... -
Mycorrhizal communities of Lophomyrtus bullata
Fungal ITS and 18S metabarcoding data associated with Lophomyrtus bullata, and associated code used to process and analyse the data. This relates to the paper The mycorrhizal... -
Land use impacts on soil invertebrate biodiversity
Soil invertebrates COI DNA metabarcoding data, analysis code, and outputs, relating to the paper Andrew Dopheide, Andreas Makiola, Kate H. Orwin, Robert J. Holdaway, Jamie R.... -
MiSeq barcoding of 450 invertebrates data
Demultiplexed Illumina sequence data (COI) from 450 invertebrate specimens, related to the paper Fast-tracking bespoke DNA reference database generation from museum collections... -
Ashley Dene lysimeter experiment 1
Processed DNA metabarcoding data and analysis code from an experiment to investigate temporal effects of labile carbon inputs on bacterial and fungal biodiversity in urine... -
Ashley Dene deep soil cores
Processed DNA metabarcoding data and analysis code from Ashley Dene deep soil cores analysis project, relating to the manuscript: Depth-structuring of multi-kingdom soil... -
Code for A History of Open Temperature and Rainfall with Uncertainty in New Z...
Python code used to process data in the production of A History of Open Weather in New Zealand (HOWNZ): an open access 1 km resolution monthly 1910-2019 time-series of... -
Binary space partitioning neutral landscape models code
Python and NetLogo code used to create binary space partitioning neutral landscape models in support of the paper: Etherington TR, Morgan FJ, O’Sullivan D. Binary space... -
Biodiversity tool simulations
ata simulations (and R-code) used to show how an evidence-based tool, designed for biodiversity assessments within New Zealand farm businesses, can be applied to: (1) explore... -
Computational reproducibility within the New Zealand Journal of Ecology
R code to reproduce the figures used in: Etherington TR, Brock JMP, Perry GLW, Wyse SV (2021) Implementing the Transparency and Openness Promotion (TOP) Guidelines for data and... -
Black swan egg harvest experiment data
Data on black swan egg-laying rates, egg hatching probability, and overall nest hatching success associated with different customary egg harvest regimes implemented at Te... -
Soil physical properties
Subset of samples used to develop the intergranular mixing particle size distribution model (IMP model). The model is able to derive the soil water retention curve using... -
Climatic limits of temperate rainforest tree species
This project contains the data files and R script supporting the paper: Laughlin DC, Delzon S, Clearwater MJ, Bellingham PJ, McGlone MS, Richardson SJ 2020. Climatic limits of... -
Optimising survey effort to monitor environmental variables
A new statistical power analysis R package simr informs environmental monitoring design within New Zealand's main kiwifruit growing region (Bay of Plenty). The pilot data for 13... -
NZ Garden Bird Survey | Logo development
Process used to select a logo for the NZ Garden Bird Survey. The NZGBS community was invited to vote and comment on eight candidate logo concepts. This work was undertaken as... -
Makiola et al DNA metabarcoding sequence data
Raw DNA metabarcoding sequence files from Makiola et al.Land use is a determinant of plant pathogen alpha- but not beta-diversity. Mol Ecol. 2019; 28: 3786– 3798.... -
S-map
S-map is the new national soils database for New Zealand. When completed, it will provide a seamless digital soil map coverage for New Zealand. S-map is designed to be applied... -
Data - Biases in the metabarcoding of plant pathogens
We investigated and analysed the causes of differences between next-generation sequencing metabarcoding approaches and traditional DNA cloning in the detection and...
